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Integer Sequence software
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Integer Sequence

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Added: October 24, 2010 | Visits: 961

Bio::Tools::Run::PiseApplication::fasta Bio::Tools::Run::PiseApplication::fasta is a Bioperl class for sequence database search. Parameters: fasta (Excl) Fasta program query (Sequence) Query sequence File pipe: seqfile seqtype (Excl) Is it a DNA or protein sequence (-n) protein_db (Excl) Protein Database nucleotid_db...



Platforms: *nix

License: Freeware Size: 82.94 KB Download (79): Bio::Tools::Run::PiseApplication::fasta Download

Added: May 10, 2013 | Visits: 231

Farey Sequence This function provides farey sequence, F(n), for any integer n.There's probably a more elegant solution out there, but I couldn't find it. Note: it doesn't prepend (0,1) and append (1,1)...





Platforms: Windows, Mac, *nix, Python, BSD Solaris

License: Freeware Download (29): Farey Sequence Download

Added: June 16, 2013 | Visits: 209

m-sequence generation program using a search algorithm Maximum length sequence assuming distinctvalues = baseVal^powerVal-1 [ms]=mseqSearch(powerVal,baseVal) OUTPUT: ms: generated maximum length sequence, of length basisVal^powerVal-1 such that all values occur with equal frequency=basisVal except zero, which occurs basisVal-1 times INPUT: baseVal:...


Platforms: Matlab

License: Freeware Size: 10 KB Download (19): m-sequence generation program using a search algorithm Download

Released: January 11, 2005  |  Added: September 11, 2006 | Visits: 6.049

EventStudio Sequence Diagram Designer Sequence diagrams are a very effective way of modeling an object oriented system. Unfortunately, most UML based modeling tools only offer primitive support for sequence diagrams. EventStudio provides advanced constructs for sequence diagram based object modeling. EventStudio supports generation...


Platforms: Windows

License: Shareware Cost: $99.00 USD Size: 3.22 MB Download (297): EventStudio Sequence Diagram Designer Download

Released: July 11, 2005  |  Added: July 03, 2006 | Visits: 7.670

Sequence Diagram Editor Windows modeling tool that simplifies and speeds up the creation and maintenance of UML sequence diagrams, telecom/wireless call flow diagrams and process workflow diagrams. Sequence Diagram Editor performs automatic layout/formatting (across multiple pages if necessary) and supports additional...


Platforms: Windows

License: Shareware Cost: $99.00 USD Size: 6.82 MB Download (538): Sequence Diagram Editor Download

Added: November 10, 2010 | Visits: 691

Set::Integer::Gapfillers Set::Integer::Gapfillers is a Perl module that can fill in the gaps between integer ranges. SYNOPSIS use Set::Integer::Gapfillers; $gf = Set::Integer::Gapfillers->new( lower => -12, upper => 62, sets => [ [ 1, 17 ], # Note: Use comma, not [ 25, 42 ], # range operator (..) [ 44, 50 ],...


Platforms: *nix

License: Freeware Size: 17.41 KB Download (70): Set::Integer::Gapfillers Download

Added: September 21, 2010 | Visits: 1.021

UML::Sequence UML::Sequence is a Perl module to render UML sequence diagrams, often by running the code. SYNOPSIS use UML::Sequence; my $tree = UML::Sequence->new(@methods, @outline, &parse_method); print $tree->build_xml_sequence(Title); To use this package, or see how to use it, see genericseq.pl...


Platforms: *nix

License: Freeware Size: 122.88 KB Download (142): UML::Sequence Download

Added: January 11, 2010 | Visits: 658

UML::Sequence::JavaSeq UML::Sequence::JavaSeq is a Perl module for use with genericseq.pl script, works on compiled Java programs. SYNOPSIS genericseq.pl UML::Sequence::JavaSeq Hello.methods Hello > Hello.xml seq2svg.pl Hello.xml > Hello.svg OR genericseq.pl UML::Sequence::JavaSeq Hello.methods Hello |...


Platforms: *nix

License: Freeware Size: 122.88 KB Download (75): UML::Sequence::JavaSeq Download

Added: July 09, 2010 | Visits: 998

Chart::Sequence Chart::Sequence is a sequence Perl class. SYNOPSIS use Chart::Sequence; my $s = Chart::Sequence->new( Nodes => [qw( A B C )], Messages => [ [ A => B => "Message 1" ], [ B => A => "Ack 1" ], [ B => C => "Message 2" ], ], ); # or # my $s = Chart::Sequence->new( SeqMLInput =>...


Platforms: *nix

License: Freeware Size: 15.36 KB Download (88): Chart::Sequence Download

Added: June 10, 2010 | Visits: 860

Bio::SeqIO::fastq Bio::SeqIO::fastq is a fastq sequence input/output stream. SYNOPSIS Do not use this module directly. Use it via the Bio::SeqIO class. This object can transform Bio::Seq and Bio::Seq::SeqWithQuality objects to and from fastq flat file databases. Fastq is a file format used frequently at...


Platforms: *nix

License: Freeware Size: 4.7 MB Download (88): Bio::SeqIO::fastq Download

Added: March 15, 2010 | Visits: 833

Sequence Analysis Sequence Analysis project is a collage of coding projects which I have written over the past several years for various clients in my work as a bioinformatics consultant. These clients have graciously allowed me to release these works into the public domain as freeware for Macintosh OS X in...


Platforms: *nix

License: Freeware Size: 2.3 MB Download (90): Sequence Analysis Download

Released: July 10, 2012  |  Added: July 10, 2012 | Visits: 406

An Integer Conversion Application for Noobs An Integer Conversion Application for Noobs was designed using the Java programming language to help you convert numbers to different numbering systems. All you have to do is input the integer number you want converted, select the base system and the program will do the rest.


Platforms: Windows

License: Freeware Download (46): An Integer Conversion Application for Noobs Download

Released: November 11, 2012  |  Added: November 11, 2012 | Visits: 335

Short Sequence Location Mapper Short Sequence Location Mapper loads the sequences, then aligns them and finally graphs and tables can be generated for one or more datasets at the same time. SSLM typically works with a BLAST data output file of short Solexa reads mapped to RNA subjects (for example pre-miRNA sequences). The...


Platforms: Windows

License: Freeware Download (53): Short Sequence Location Mapper Download

Released: November 10, 2012  |  Added: November 10, 2012 | Visits: 336

Sequence Clip Reporter for Mac OS Creates an Excel spreadsheet report about the video clips, audio clips and markers you've used in your edited sequence. The report includes sheets for: Clips, Sequence Markers, Clip Markers, Clip Filters, and Reels. Sequence Clip Reporter takes the tedious work out of creating clip usage reports...


Platforms: Mac

License: Freeware Size: 3.6 MB Download (52): Sequence Clip Reporter for Mac OS Download

Released: November 07, 2012  |  Added: November 07, 2012 | Visits: 423

Sequence Chart Studio The Sequence Chart Studio, or scstudio for short, is designed as an user-friendly, Open Source drawing and verification instrument for Message Sequence Charts (basic MSC, HMSC) and UML Sequence Diagrams. It was developed in order to provide several verification algorithms and offers an open...


Platforms: Windows

License: Freeware Download (27): Sequence Chart Studio Download

Released: August 19, 2012  |  Added: August 19, 2012 | Visits: 260

FUNDAMENTALS HUGE INTEGER FUNDAMENTALS HUGE INTEGER was specially designed as a FreePascal / Delphi unit that can implement routines and classes for arbitrary size integers. Now you can make use of this handy and accessible instrument to further improve your development process.


Platforms: Windows

License: Freeware Download (27): FUNDAMENTALS HUGE INTEGER Download

Released: July 19, 2012  |  Added: July 19, 2012 | Visits: 442

Big Integer Library Big Integer Library was designed to be a dynamic C++ library that is able to operate on really big integers. The integers can be both signed and unsigned, with all the basic integer operations (as one can do with standard C/C++ primitive integer data types like "int"/"long"/"long long") provided.


Platforms: Windows

License: Freeware Download (30): Big Integer Library Download

Added: May 10, 2013 | Visits: 333

Remove duplicates from a sequence The fastest way to remove duplicates from a sequence depends on some pretty subtle properties of the sequence elements, such as whether they're hashable, and whether they support full comparisons. This script defines the unique() function that tries three methods, from fastest to slowest, letting...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

License: Freeware Download (28): Remove duplicates from a sequence Download

Added: May 10, 2013 | Visits: 200

Getting th permutation of a sequence This script contains a function that given a sequence and a number n as parameters, returns the th permutation of the sequence (always as a list).


Platforms: Windows, Mac, *nix, Python, BSD Solaris

License: Freeware Download (28): Getting th permutation of a sequence Download

Added: May 10, 2013 | Visits: 247

Generator for integer partitions Generator for integer partitions script uses an iterative procedure to deal with integer partitions.


Platforms: Windows, Mac, *nix, Python, BSD Solaris

License: Freeware Download (27): Generator for integer partitions Download

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